Publications (35) FRANCISCO ANTEQUERA MARQUEZ publications

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2024

  1. Asymmetrical nucleosomal DNA signatures regulate transcriptional directionality

    Cell Reports, Vol. 43, Núm. 1

2023

  1. Design, construction, and functional characterization of a tRNA neochromosome in yeast

    Cell, Vol. 186, Núm. 24, pp. 5237-5253.e22

2022

  1. A role for the Saccharomyces cerevisiae Rtt109 histone acetyltransferase in R-loop homeostasis and associated genome instability

    Genetics, Vol. 222, Núm. 1

  2. Genome-wide sequencing analysis of Sgs1, Exo1, Rad51, and Srs2 in DNA repair by homologous recombination

    Cell Reports, Vol. 38, Núm. 2

2019

  1. Genome-wide search of nucleosome patterns using visual analytics

    Bioinformatics, Vol. 35, Núm. 13, pp. 2185-2192

2018

  1. Analysis of DNA metabolism in fission yeast

    Cold Spring Harbor Protocols, Vol. 2018, Núm. 4, pp. 239-244

2016

  1. Nucleosomal signatures impose nucleosome positioning in coding and noncoding sequences in the genome

    Genome Research, Vol. 26, Núm. 11, pp. 1532-1543

2015

  1. A species-specific nucleosomal signature defines a periodic distribution of amino acids in proteins

    Open Biology, Vol. 5, Núm. 4

  2. Promoter nucleosome dynamics regulatedby signalling through the CTD code

    eLife, Vol. 4, Núm. JUNE 2015, pp. 1-22

  3. Replication dynamics in fission and budding yeasts through DNA polymerase tracking

    BioEssays, Vol. 37, Núm. 10, pp. 1067-1073

2014

  1. Comparative analysis of methods for genome-wide nucleosome cartography

    Briefings in Bioinformatics, Vol. 16, Núm. 4, pp. 576-587

  2. Dicer promotes transcription termination at sites of replication stress to maintain genome stability

    Cell, Vol. 159, Núm. 3, pp. 572-583

  3. Different nucleosomal architectures at early and late replicating origins in Saccharomyces cerevisiae

    BMC Genomics, Vol. 15, Núm. 1

  4. PTPN13 regulates cellular signalling and β-catenin function during megakaryocytic differentiation

    Biochimica et Biophysica Acta - Molecular Cell Research, Vol. 1843, Núm. 12, pp. 2886-2899

2013

  1. Clustered regulatory elements at nucleosome-depleted regions punctuate a constant nucleosomal landscape in Schizosaccharomyces pombe

    BMC Genomics, Vol. 14, Núm. 1

  2. Specification of DNA replication origins and genomic base composition in fission yeasts

    Journal of Molecular Biology, Vol. 425, Núm. 23, pp. 4706-4713

2012

  1. Nucleosomal organization of replication origins and meiotic recombination hotspots in fission yeast

    EMBO Journal, Vol. 31, Núm. 1, pp. 124-137

2011

  1. Gcn5 facilitates Pol II progression, rather than recruitment to nucleosome-depleted stress promoters, in Schizosaccharomyces pombe

    Nucleic Acids Research, Vol. 39, Núm. 15, pp. 6369-6379

  2. RNAi promotes heterochromatic silencing through replication-coupled release of RNA Pol II

    Nature, Vol. 479, Núm. 7371, pp. 135-138

2010

  1. Analysis of DNA strand-specific differential expression with high density tiling microarrays

    BMC Bioinformatics, Vol. 11